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Linksvayer, T A., Fewell, J, Gadau, J, and Laubichler, M D.. "Developmental Evolution in Social Insects – Regulatory Networks from Genes to Societies,." Journal of Experimental Zoology Part B: Molecular and Developmental Evolution 318 (2012): 159-169.
Leimar, O, Hartfelder, K, Laubichler, M D., and Page, R E.. "Development and evolution of caste dimorphism in honey bees — a modeling approach." Ecology and Evolution 2 (2012): 3098-3109.
Lee, Edward D., and Daniels, Bryan C.. Convenient Interface to Inverse Ising (ConIII): A Python package for solving maximum entropy models., 2018.
Lee, Edward D., Daniels, Bryan C., Krakauer, David C., and Flack, Jessica C.. "Collective memory in macaque conflict implied by temporal scaling collapse." Journal of the Royal Society Interface 14 (2017).
Lee, Edward D., Daniels, Bryan C., Myers, Christopher R., Krakauer, David C., and Flack, Jessica C.. "Emergent regularities and scaling in armed conflict data." (2019).
Laubichler, M D.. "Review of "Michael Frayn's Copenhagen in Debate"." ISIS 98 (2007): 401-402.
Laubichler, M D., Hamilton, A, and Maienschein, Jane. "Form and Function in Developmental Evolution: An Introduction." In Form and Function in Developmental Evolution, edited by M D. Laubichler and Jane Maienschein. Cambridge: Cambridge University Press, 2009.
Laubichler, M D., and Callebaut, W. "Editorial: Formalizing Biology." Biological Theory 3 (2008): 1-2.
Laubichler, Manfred D., and Sarkar, Sahotra. "Flies, Genes, and Brains: Oskar Vogt, Nicolai Timofeeff-Ressovsky and the Origin of the Concepts of Penetrance and Expressivity in Classical Genetics." In Medical Genetics. Conceptual Foundations and Classic Questions, edited by Rachel Ankeny and Lisa Parker, 63-85. Dordrecht: Kluwer, 2002.
Laubichler, M D.. "Review of "The man who invented the chromosome: A lfie of Cyril Darlington"." Journal of the History of medicine and Allied Sciences 60 (2005): 520-522.
Laubichler, M D., and Rheinberger, H J.. "Alfred Kuhn (1885-1968) and developmental evolution." Journal of Experimental Zoology Part B: Molecular and Developmental Evolution 302B (2004): 103-110.
Laubichler, Manfred D.. "Homology as a bridge between evolutionary morphology, developmental evolution and phylogenetic systematics." In The Evolution of Phylogenetic Systematics, 63-85. Berkeley: University of California Press, 2013.
Laubichler, M D.. "Robert Lepage's Vision." In Jahrbuch 2009/10, 120-122. Wissenschaftskolleg zu Berlin, 2010.
Laubichler, M D.. "Mathematik und Statistik." In Evolution. Ein interdisziplinäres Handbuch, edited by P Sarasin and M Sommer, 180-185. Metzler Verlag, 2010.
Laubichler, M D.. "Units and Levels of Selection in Developing Systems." In Keywords and Concepts in Evolutionary Developmental Biology, edited by Brian Hall and Wendy Olson, 332-341. Cambridge, MA: Harvard University Press, 2003.
Laubichler, M D.. "Review of "Membranes: Metaphors of invasion in nineteenth-century literature, science, and politics"." Journal of Interdisciplinary History (2001): 287-288.
Laubichler, Manfred D.. "The specter of the past: what the history of theoretical biology means today?" Biological Theory 2 (2007): 131-133.
Laubichler, M D.. Konrad Lorenz—Biogramm In Kindlers Literatur Lexikon 3. vollständig neu bearbeitete Auflage, Edited by H L. Arnold. Suttgart: Metzler Verlag, 2009.
Laubichler, M D.. "August Weismann." In Evolution: The first four Billion Year, edited by M Ruse and J Travis. Cambridge, MA: Harvard University Press, 2009.
Laubichler, M D.. "A semiotic perspective on biological objects and biological functions." SEMIOTICA (1999): 415-431.
Laubichler, M D.. Organism In Norton Dictionary of Modern Thought, 3rd edition. W.W. Norton, 1998.
Laubichler, Manfred D.. "The Nature of Biological Concepts." European Journal for Semiotic Studies 9 (1997): 251-276.
Laubichler, M D.. "Review of "Epistemology of the concrete: Studies on the history of modern biology"." Journal of the History of Biology 39 (2006): 415-417.
Laubichler, M D., and Maienschein, Jane. "Evolution and Society." In The First Four Billion Years, edited by Michael Ruse and Joseph Travis. Cambridge, MA: Harvard University Press, 2009.
Laubichler, M D., and Pyne, L. "The Borges Challenge in Biology, Review of "Genetics and the Logic of Evolution"." BioEssays 28 (2006): 768-769.