Publications

Found 260 results
Author Title Type [ Year(Asc)]
2019
Automated, predictive, and interpretable inference of Caenorhabditis elegans escape dynamics, Daniels, Bryan C., Ryu William S., and Nemenman Ilya , PNAS, Volume 116, Issue 7226, (2019)
A Computational Research System for the History of Science, Damerow, Julia, Peirson Erick, and Laubichler Manfred D. , Culture and Cognition: Essays in Honor of Peter Damerow , Volume 11, (2019)
Emergent regularities and scaling in armed conflict data., Lee, Edward D., Daniels Bryan C., Myers Christopher R., Krakauer David C., and Flack Jessica C. , (2019)
Quantifying the impact of network structure on speed and accuracy in collective decision-making, Daniels, Bryan C., and Romanczuk Pawel , (2019)
2018
Automated, predictive, and interpretable inference of C. elegans escape dynamics, Daniels, Bryan C., S.Ryu William, and Nemenman Ilya , (2018)
Convenient Interface to Inverse Ising (ConIII): A Python package for solving maximum entropy models, Lee, Edward D., and Daniels Bryan C. , (2018)
Criticality Distinguishes the Ensemble of Biological Regulatory Networks, Daniels, Bryan C., Kim Hyunju, Moore Douglas, Zhou Siyu, Smith Harrison B., Karas Bradley, Kauffman Stuart A., and Walker Sara I. , Phys. Rev. Lett., 09/28/2018, Volume 121, Issue 13, (2018)
From systems to biology: A computational analysis of the research articles on systems biology from 1992 to 2013, Zou, Yawen, and Laubichler Manfred , PLOS ONE, 07/2018, Volume 13, Issue 7, (2018)
Locating decision-making circuits in a heterogeneous neural network, Arehart, Emerson, Jin Tangxin, and Daniels Bryan C. , Frontiers in Applied Mathematics and Statistics, 11/2018, Volume 4, (2018)
Parameter Estimation, Sloppiness, and Model Identifiability., Daniels, Bryan C., Fey Dirk, Dobrzyński Maciej, Munsky B., Hlavacek W., and Tsimring L. , In Quantitative Biology: Theory, Computational Methods, and Models, (2018)
A unified, mechanistic framework for developmental and evolutionary change, Borriello, Enrico, Walker Sara, and Laubichler Manfred , 09/2018, (2018)
2017
Collective memory in macaque conflict implied by temporal scaling collapse, Lee, Edward D., Daniels Bryan C., Krakauer David C., and Flack Jessica C. , Journal of the Royal Society Interface , 02/2017, Volume 14, (2017)
Control of finite critical behaviour in a small-scale social system, Daniels, Bryan C., Krakauer David C., and Flack Jessica C. , Nature Communications, 02/2017, Volume 8, (2017)
The diversity of experimental organisms in biomedical research may be influenced by biomedical funding, Peirson, B. R. Erick, Kropp Heather, Damerow Julia, and Laubichler Manfred D. , BioEssays, Volume 39, p.1600258–n/a, (2017)
Dual Coding Theory Explains Biphasic Collective Computation in Neural Decision-Making, Daniels, Bryan C., Flack Jessica C., and Krakauer David C. , Frontiers in Neuroscience, Volume 11, p.313, (2017)
Experiments and evidence in sustainability science: A typology, Caniglia, Guido, Schäpke Niko, Lang Daniel J., Abson David J., Luederitz Christopher, Wiek Arnim, Laubichler Manfred D., Gralla Fabienne, and von Wehrden Henrik , Journal of Cleaner Production, (2017)
The Giles Ecosystem – Storage, Text Extraction, and OCR of Documents, Damerow, Julia, Peirson B.R. Erick, and Laubichler Manfred , Journal of Open Research Software, 09/2017, Volume 5, Issue 1, (2017)
Measuring the contributions of Chinese scholars to the research field of systems biology from 2005 to 2013, Zou, Yawen, and Laubichler Manfred D. , Scientometrics, 1, p.1–17, (2017)
Quantitative Perspectives on Fifty Years of the Journal of the History of Biology, Peirson, Erick, Bottino Erin, Damerow Julia, and Laubichler Manfred , Journal of the History of Biology, 11/2017, Volume 50, Issue 4, (2017)
2016
Effect of exercise training on sleep apnea: A systematic review and meta-analysis, Aiello, Kenneth D., Caughey William G., Nelluri Bhargava, Sharma Ashwini, Mookadam Farouk, and Mookadam Martina , Respiratory Medicine, 08/2016, Volume 116, Issue 92, (2016)
An experience-based learning framework: Activities for the initial development of sustainability competencies, Caniglia, Guido, John Beatrice, Kohler Martin, Bellina Leonie, Wiek Arnim, Rojas Christopher, Laubichler Manfred D., and Lang Daniel , International Journal of Sustainability in Higher Education, Volume 17, p.827–852, (2016)
Intersezioni fra Biologia dello Sviluppo ed Ecosistemica. Nuove Prospettive per l’Evoluzione, Federica, Turriziani Colonna, and Rispoli Giulia , Paradigmi, (forthcoming, 2013), (2016)
Quantifying collectivity, Daniels, Bryan C., Ellison Christopher J., Krakauer David C., and Flack Jessica C. , Current Opinion in Neurobiology, Volume 37, p.106 - 113, (2016)
Software development & trans-disciplinary training at the interface of digital humanities and computer science, Peirson, B. R., Damerow Julia, and Laubichler Manfred , Digital Studies / Le champ numérique, (2016)
2015
Automated adaptive inference of phenomenological dynamical models, Daniels, Bryan C., and Nemenman Ilya , Aug, Volume 6, p.8133 EP -, (2015)

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